#1: Bioinformatics
10/22/11
BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons
Visualising a prokaryote genome as a circular image has become a powerful means of displaying informative comparisons of one genome to a number of others. A new visualisation and abstraction method was required in order to improve the validation, interpretation and communication of genome sequence information;
CloVR: A virtual machine for automated and portable sequence analysis from the desktop using cloud computing.
Next-generation sequencing technologies have decentralized sequence acquisition, increasing the demand for new bioinformatics tools that are easy to use,
10/21/11
Characterization of mitogen activated protein kinases (MAPKs) in the Curcuma longa expressed sequence tag database.
Molecular modeling and identification of substrate binding site of orphan human cytochrome P450 4F22.
Cytochromes P450 (CYP) which are a superfamily of heme containing enzymes play an important role in detoxification and metabolic activation and which generally monooxygenate hydrophobic compounds. The human cytochrome P450 4F22 (CYP4F22) was categorized
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome.
A new user-friendly software package named RNA-Seq by Expectation Maximization (RSEM), which works on RNA-seq data has been developed under Department of Computer Sciences, University of Wisconsin-Madison by Bo Li and Colin N Dewey. RNA-Seq is a powerful technology for
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#2: Cancer Biology
New Oncolytic Virus Shows Improved Effectiveness in Preclinical Testing
A new fourth-generation oncolytic virus designed to both kill cancer cells and inhibit blood-vessel growth has shown greater effectiveness than earlier versions when tested in animal models of human brain cancer.
#3: Developmental Biology
Plasticity of photoreceptor-generating retinal progenitors revealed by prolonged retinoic acid exposure.
Retinoic acid (RA) is important for vertebrate eye morphogenesis and is a regulator of photoreceptor development in the retina. The vertebrate retina forms from a neuroepithelium that develops into a complex, layered structure of neurons consisting of
#3: Clinical Research
Researchers Design A Viral Vector To Treat A Genetic Form Of Blindness
Researchers at Ohio State University Medical Center and Nationwide Children's Hospital have developed a viral vector designed to deliver a gene into the eyes of people born with an inherited, progressive form of blindness that affects mainly males.






























