BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons
Visualising a prokaryote genome as a circular image has become a powerful means of displaying informative comparisons of one genome to a number of others. A new visualisation and abstraction method was required in order to improve the validation, interpretation and communication of genome sequence information;
CloVR: A virtual machine for automated and portable sequence analysis from the desktop using cloud computing.
Next-generation sequencing technologies have decentralized sequence acquisition, increasing the demand for new bioinformatics tools that are easy to use,
Characterization of mitogen activated protein kinases (MAPKs) in the Curcuma longa expressed sequence tag database.
Molecular modeling and identification of substrate binding site of orphan human cytochrome P450 4F22.
Cytochromes P450 (CYP) which are a superfamily of heme containing enzymes play an important role in detoxification and metabolic activation and which generally monooxygenate hydrophobic compounds. The human cytochrome P450 4F22 (CYP4F22) was categorized
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome.
A new user-friendly software package named RNA-Seq by Expectation Maximization (RSEM), which works on RNA-seq data has been developed under Department of Computer Sciences, University of Wisconsin-Madison by Bo Li and Colin N Dewey. RNA-Seq is a powerful technology for
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